BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F05SP1|AL426394
(718 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1082 342 8e-94
3x_Contig1609 186 7e-47
>3x_Contig1082
Length = 4646
Score = 342 bits (160), Expect = 8e-94
Identities = 181/197 (91%)
Strand = Plus / Minus
Query: 1 tcttatyatattcaaaaatatattcctaatgcaatagctataggagatgatgaaggggga 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3234 tcttatcatattcaaaaatatattcctaatgcaatagctataggagatgatgaaggggga 3175
Query: 61 caggtaatattttatgcaacaggagatgatggttatggnctatataaagkaggattcgga 120
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 3174 caggtaatattttatgcaacaggagatgatggttatggtctatataaagtaggattcgga 3115
Query: 121 aatcttgatattgaggatgskgttttcatctctaakagkcttkatgagkkgtkaatgaaa 180
||||||||||||||||||| |||||||||||||| || ||| |||| || |||||||
Sbjct: 3114 aatcttgatattgaggatgctgttttcatctctaatagtctttatgatttgttaatgaaa 3055
Query: 181 gggaatggsackgakaa 197
|| ||||| || || ||
Sbjct: 3054 ggtaatggcactgataa 3038
Score = 280 bits (131), Expect = 3e-75
Identities = 137/139 (98%)
Strand = Plus / Minus
Query: 580 aggaaaaacgaaagagcatgaatttgggaagtattgtatatcgagtaaaagtgtatttga 639
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2654 aggaaaaactaaatagcatgaatttgggaagtattgtatatcgagtaaaagtgtatttga 2595
Query: 640 tgatagagatatcatcaattgtctattagaaattacatcaacacagcaaaatacatgact 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2594 tgatagagatatcatcaattgtctattagaaattacatcaacacagcaaaatacatgact 2535
Query: 700 agtccatttccaaaatttc 718
|||||||||||||||||||
Sbjct: 2534 agtccatttccaaaatttc 2516
>3x_Contig1609
Length = 15966
Score = 186 bits (87), Expect = 7e-47
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 580 aggaaaaacgaaagagcatgaatttgggaagtattgtatatcgagtaaaagtgtatttga 639
||||||||| ||| ||| |||| |||| ||||||||||||||||||||||||| |||| |
Sbjct: 3695 aggaaaaacaaaatagcttgaacttggaaagtattgtatatcgagtaaaagtgcatttaa 3754
Query: 640 tgatagagatatcatcaattgtctattagaaattacatcaacacagcaaaatacatgact 699
||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3755 tgatagagatatcattaatcgtctattagaaattacatcaacacagcaaaagacatgact 3814
Query: 700 agtccat 706
|||||||
Sbjct: 3815 agtccat 3821
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.48 0.727 1.39
Gapped
Lambda K H
1.48 0.727 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2586
Number of Sequences: 1807
Number of extensions: 2586
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 2
length of query: 718
length of database: 10,358,551
effective HSP length: 15
effective length of query: 703
effective length of database: 10,331,446
effective search space: 7263006538
effective search space used: 7263006538
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 14 (29.9 bits)
S1: 11 (23.9 bits)
S2: 47 (100.8 bits)